Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RPC_3531 | RPC_3532 | Conserved hypothetical protein. | Conjugation TrbI-like protein. | 0.940 |
RPC_3531 | RPC_3533 | Conserved hypothetical protein. | Conjugal transfer protein TrbG/VirB9/CagX. | 0.922 |
RPC_3531 | RPC_3534 | Conserved hypothetical protein. | Conjugal transfer protein. | 0.944 |
RPC_3531 | RPC_3535 | Conserved hypothetical protein. | TrbL/VirB6 plasmid conjugal transfer protein. | 0.947 |
RPC_3531 | RPC_3537 | Conserved hypothetical protein. | Putative conjugal transfer protein TrbJ. | 0.947 |
RPC_3531 | RPC_3538 | Conserved hypothetical protein. | ATPase. | 0.916 |
RPC_3531 | RPC_3539 | Conserved hypothetical protein. | Conjugal transfer protein TrbD. | 0.936 |
RPC_3531 | RPC_3540 | Conserved hypothetical protein. | Conjugal transfer protein TrbC. | 0.913 |
RPC_3531 | RPC_3541 | Conserved hypothetical protein. | Type II secretion system protein E. | 0.831 |
RPC_3531 | RPC_3898 | Conserved hypothetical protein. | ATPase. | 0.641 |
RPC_3532 | RPC_3531 | Conjugation TrbI-like protein. | Conserved hypothetical protein. | 0.940 |
RPC_3532 | RPC_3533 | Conjugation TrbI-like protein. | Conjugal transfer protein TrbG/VirB9/CagX. | 0.998 |
RPC_3532 | RPC_3534 | Conjugation TrbI-like protein. | Conjugal transfer protein. | 0.955 |
RPC_3532 | RPC_3535 | Conjugation TrbI-like protein. | TrbL/VirB6 plasmid conjugal transfer protein. | 0.956 |
RPC_3532 | RPC_3537 | Conjugation TrbI-like protein. | Putative conjugal transfer protein TrbJ. | 0.956 |
RPC_3532 | RPC_3538 | Conjugation TrbI-like protein. | ATPase. | 0.991 |
RPC_3532 | RPC_3539 | Conjugation TrbI-like protein. | Conjugal transfer protein TrbD. | 0.954 |
RPC_3532 | RPC_3540 | Conjugation TrbI-like protein. | Conjugal transfer protein TrbC. | 0.959 |
RPC_3532 | RPC_3541 | Conjugation TrbI-like protein. | Type II secretion system protein E. | 0.937 |
RPC_3532 | RPC_3898 | Conjugation TrbI-like protein. | ATPase. | 0.963 |
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