STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_3709Flp/Fap pilin component. (53 aa)    
Predicted Functional Partners:
RPC_3712
Flp pilus assembly CpaB.
 
  
 0.959
RPC_3715
Putative pilus assembly protein cpaE.
 
  
 0.958
RPC_3711
Peptidase A24A, prepilin type IV.
 
  
 0.911
RPC_3718
Type II secretion system protein.
 
  
 0.855
RPC_3717
Type II secretion system protein.
 
  
 0.853
RPC_3713
Type II and III secretion system protein; Belongs to the bacterial secretin family.
 
  
 0.844
RPC_3708
Conserved hypothetical protein.
 
  
 0.835
RPC_3706
TadE-like.
 
  
 0.830
RPC_3707
TadE-like.
 
  
 0.819
RPC_3719
Tetratricopeptide TPR_2.
 
  
 0.764
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.