STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_4100Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. (559 aa)    
Predicted Functional Partners:
RPC_3803
CheA signal transduction histidine kinases.
 
 0.992
RPC_4247
CheA signal transduction histidine kinases.
 
 0.992
RPC_3802
CheW protein.
 
 0.954
RPC_4246
CheW protein.
 
 0.954
RPC_4676
CheA signal transduction histidine kinases.
 
 0.929
RPC_4670
CheW protein.
 
 0.917
RPC_4607
CheA signal transduction histidine kinases.
 
 0.913
RPC_1252
Transcriptional regulator, AraC family.
  
 
 0.912
RPC_3801
MCP methyltransferase, CheR-type.
 
 0.906
RPC_4243
MCP methyltransferase, CheR-type.
 
 0.906
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
Server load: medium (78%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.