Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPC_4169Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (433 aa)    
Predicted Functional Partners:
RPC_4168
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
RPC_4167
ABC transporter, periplasmic branched chain amino acid binding protein.
 
 
  0.994
RPC_4170
ABC transporter related.
  
 0.982
RPC_4171
ABC transporter related.
 
  
 0.980
RPC_4177
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.967
RPC_4178
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.917
RPC_1371
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.880
RPC_1018
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.868
RPC_1373
ABC transporter related.
  
 0.862
RPC_0837
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.855
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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