STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_4276NHL repeat. (543 aa)    
Predicted Functional Partners:
RPC_3362
Amino acid adenylation.
 
  
 0.894
RPC_1205
Cytochrome-c peroxidase.
  
 
 0.880
RPC_3369
Amino acid adenylation.
  
  
 0.874
RPC_3032
Amino acid adenylation.
  
  
 0.823
RPC_0557
Cytochrome c, class I.
  
 
 0.709
tolB
Twin-arginine translocation pathway signal; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
 
 0.705
RPC_3504
Conserved hypothetical protein.
   
   0.683
RPC_3632
Conserved hypothetical protein.
   
   0.683
RPC_0012
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.681
RPC_1441
Putative diheme cytochrome c-553.
  
 
 0.681
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.