Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RPC_4367Hypothetical protein. (107 aa)    
Predicted Functional Partners:
RPC_4366
DNA methylase N-4/N-6; Belongs to the N(4)/N(6)-methyltransferase family.
       0.492
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.457
flgI-2
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.457
RPC_0870
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
   
    0.451
RPC_0985
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
   
    0.451
RPC_1116
Flagellar hook capping protein.
   
    0.451
RPC_1094
Flagellar basal body rod protein.
   
    0.443
RPC_1517
Flagellar basal body rod protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.443
RPC_1095
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
    0.437
RPC_1518
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
    0.437
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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