Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPC_4429Phosphonate uptake transporter. (282 aa)    
Predicted Functional Partners:
RPC_4431
Phosphonate-binding periplasmic protein.
 
 
 0.994
RPC_4430
Phosphonate uptake transporter.
 
  
 
0.988
phnC2
Phosphonate ABC transporter PhnC, ATP-binding; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 
 0.981
phnC1
Phosphonate ABC transporter PhnC, ATP-binding; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 
 0.967
RPC_3866
Phosphonate-binding periplasmic protein.
 
 
 0.960
RPC_4434
Phosphonate metabolism PhnM.
 
  
 0.683
RPC_1284
Phosphonate metabolism.
 
  
 0.676
RPC_1285
Phosphonate metabolism.
 
  
 0.640
RPC_1282
Phosphonate C-P lyase system, PhnK.
 
  
 0.613
RPC_1283
Phosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
  
 0.607
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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