Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RPC_0737 | RPC_1037 | acyl-CoA dehydrogenase-like. | acyl-CoA dehydrogenase-like. | 0.905 |
RPC_0737 | RPC_1674 | acyl-CoA dehydrogenase-like. | Enoyl-CoA hydratase. | 0.736 |
RPC_0737 | RPC_2051 | acyl-CoA dehydrogenase-like. | butyryl-CoA dehydrogenase. | 0.909 |
RPC_0737 | RPC_2197 | acyl-CoA dehydrogenase-like. | acyl-CoA dehydrogenase-like. | 0.917 |
RPC_0737 | RPC_3363 | acyl-CoA dehydrogenase-like. | AMP-dependent synthetase and ligase. | 0.601 |
RPC_0737 | RPC_3369 | acyl-CoA dehydrogenase-like. | Amino acid adenylation. | 0.767 |
RPC_0737 | RPC_4479 | acyl-CoA dehydrogenase-like. | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.727 |
RPC_0737 | RPC_4878 | acyl-CoA dehydrogenase-like. | 3-hydroxyacyl-CoA dehydrogenase. | 0.575 |
RPC_1037 | RPC_0737 | acyl-CoA dehydrogenase-like. | acyl-CoA dehydrogenase-like. | 0.905 |
RPC_1037 | RPC_1674 | acyl-CoA dehydrogenase-like. | Enoyl-CoA hydratase. | 0.736 |
RPC_1037 | RPC_2051 | acyl-CoA dehydrogenase-like. | butyryl-CoA dehydrogenase. | 0.919 |
RPC_1037 | RPC_2197 | acyl-CoA dehydrogenase-like. | acyl-CoA dehydrogenase-like. | 0.913 |
RPC_1037 | RPC_3363 | acyl-CoA dehydrogenase-like. | AMP-dependent synthetase and ligase. | 0.601 |
RPC_1037 | RPC_3369 | acyl-CoA dehydrogenase-like. | Amino acid adenylation. | 0.767 |
RPC_1037 | RPC_4479 | acyl-CoA dehydrogenase-like. | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.727 |
RPC_1037 | RPC_4878 | acyl-CoA dehydrogenase-like. | 3-hydroxyacyl-CoA dehydrogenase. | 0.815 |
RPC_1156 | RPC_1674 | acyl-CoA dehydrogenase-like. | Enoyl-CoA hydratase. | 0.736 |
RPC_1156 | RPC_3363 | acyl-CoA dehydrogenase-like. | AMP-dependent synthetase and ligase. | 0.601 |
RPC_1156 | RPC_3369 | acyl-CoA dehydrogenase-like. | Amino acid adenylation. | 0.767 |
RPC_1156 | RPC_4479 | acyl-CoA dehydrogenase-like. | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.727 |
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