STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_45764Fe-4S ferredoxin, iron-sulfur binding. (205 aa)    
Predicted Functional Partners:
RPC_4570
NADH dehydrogenase (ubiquinone), 30 kDa subunit.
 
 
 0.986
RPC_4578
Formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.917
RPC_0933
NADH-ubiquinone oxidoreductase, chain 49kDa.
  
 
 0.913
RPC_4567
Processing of large subunit (HycE) of hydrogenase 3.
 
  
 0.913
RPC_4566
HycI peptidase. Aspartic peptidase. MEROPS family A31.
 
  
 0.909
RPC_4574
Respiratory-chain NADH dehydrogenase, subunit 1.
 
 
 0.889
RPC_4568
NADH ubiquinone oxidoreductase, 20 kDa subunit.
 
 
 0.886
RPC_4575
NADH dehydrogenase (quinone).
 
 
 0.880
RPC_0704
Pyruvate flavodoxin/ferredoxin oxidoreductase-like.
  
  
 0.859
RPC_4572
NADH-ubiquinone oxidoreductase, chain 4L.
 
   
 0.851
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.