Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPC_4606Conserved hypothetical protein. (77 aa)    
Predicted Functional Partners:
RPC_4613
Methyl-accepting chemotaxis sensory transducer.
       0.815
RPC_4610
PBS lyase HEAT-like repeat.
       0.808
RPC_4607
CheA signal transduction histidine kinases.
       0.799
RPC_4608
Response regulator receiver domain protein (CheY-like).
       0.797
RPC_4609
MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
       0.793
cheB2
Response regulator receiver (CheY-like) modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
       0.793
RPC_4612
CheW protein.
       0.790
RPC_4605
Response regulator receiver domain protein (CheY-like).
       0.703
RPC_4604
CheC, inhibitor of MCP methylation.
       0.688
RPC_4603
PAS/PAC sensor hybrid histidine kinase.
       0.648
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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