STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_4635Hydrophobe/amphiphile efflux-1 HAE1. (1047 aa)    
Predicted Functional Partners:
RPC_4636
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.996
RPC_1189
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.984
RPC_3586
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.984
RPC_1870
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.981
RPC_2730
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.964
RPC_4616
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.950
RPC_3371
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.949
RPC_2568
Type I secretion outer membrane protein, TolC.
 
 0.945
RPC_2557
RND efflux system, outer membrane lipoprotein, NodT.
 0.936
RPC_3372
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  
 
0.917
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.