STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_4735FAD linked oxidase-like. (413 aa)    
Predicted Functional Partners:
RPC_4734
Protein of unknown function DUF224, cysteine-rich region.
 
 
 0.998
RPC_4736
FAD linked oxidase-like.
  
 
0.979
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
 
 
 0.932
gph
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
 
  
 0.923
RPC_3625
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.920
RPC_4689
Aminotransferase, class V.
 
 
 0.920
RPC_0354
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
   
 0.914
RPC_3470
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
   
 0.914
RPC_1379
Isocitrate lyase.
     
 0.905
RPC_4115
L-lactate dehydrogenase (cytochrome).
 
 0.666
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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