Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPC_4927OmpA/MotB. (464 aa)    
Predicted Functional Partners:
RPC_4926
Conserved hypothetical protein.
       0.865
RPC_4031
Signal transduction histidine kinase.
  
     0.638
RPC_4667
Methyl-accepting chemotaxis sensory transducer.
 
     0.614
RPC_4925
Conserved hypothetical protein.
       0.607
tolB
Twin-arginine translocation pathway signal; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.603
RPC_3456
Methyltransferase type 11.
  
     0.573
RPC_4928
Polysaccharide deacetylase.
       0.567
RPC_0277
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
 
 0.545
RPC_4924
Histidine kinase.
     
 0.531
RPC_3400
Conserved hypothetical protein.
  
  
 0.529
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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