Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPD_0048ABC-type branched-chain amino acid transport systems periplasmic component-like. (410 aa)    
Predicted Functional Partners:
RPD_0052
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.990
RPD_0053
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.990
RPD_4370
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.771
RPD_1044
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.763
RPD_1046
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.753
RPD_1587
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.753
RPD_3134
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.753
RPD_3133
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.748
RPD_2331
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.743
RPD_0051
ABC transporter related.
 
    0.739
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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