Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RPD_0071Protein of unknown function DUF423. (122 aa)    
Predicted Functional Partners:
engB
GTP-binding; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
       0.868
RPD_2661
Conserved hypothetical protein.
  
     0.735
RPD_3269
Conserved hypothetical protein.
  
     0.711
RPD_0847
WD-40 repeat.
 
     0.708
argB
N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
       0.685
RPD_0181
Protein of unknown function DUF1150.
  
     0.676
RPD_2626
Invasion associated locus B.
  
     0.672
RPD_4364
Conserved hypothetical protein.
  
     0.670
RPD_1242
Conserved hypothetical protein.
  
     0.667
RPD_3893
Conserved hypothetical protein.
  
     0.651
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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