Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPD_0091 | RPD_0092 | RPD_0091 | RPD_0092 | Conserved hypothetical protein. | Protein of unknown function DUF985. | 0.565 |
RPD_0091 | RPD_0094 | RPD_0091 | RPD_0094 | Conserved hypothetical protein. | Methyltransferase type 11. | 0.410 |
RPD_0091 | gloB | RPD_0091 | RPD_0093 | Conserved hypothetical protein. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.565 |
RPD_0092 | RPD_0091 | RPD_0092 | RPD_0091 | Protein of unknown function DUF985. | Conserved hypothetical protein. | 0.565 |
RPD_0092 | RPD_0094 | RPD_0092 | RPD_0094 | Protein of unknown function DUF985. | Methyltransferase type 11. | 0.587 |
RPD_0092 | gloB | RPD_0092 | RPD_0093 | Protein of unknown function DUF985. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.875 |
RPD_0094 | RPD_0091 | RPD_0094 | RPD_0091 | Methyltransferase type 11. | Conserved hypothetical protein. | 0.410 |
RPD_0094 | RPD_0092 | RPD_0094 | RPD_0092 | Methyltransferase type 11. | Protein of unknown function DUF985. | 0.587 |
RPD_0094 | gloB | RPD_0094 | RPD_0093 | Methyltransferase type 11. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.623 |
RPD_0134 | RPD_1406 | RPD_0134 | RPD_1406 | Beta-lactamase-like. | Protein of unknown function DUF882. | 0.727 |
RPD_0134 | RPD_2528 | RPD_0134 | RPD_2528 | Beta-lactamase-like. | Glyoxalase/bleomycin resistance protein/dioxygenase. | 0.918 |
RPD_0134 | RPD_3364 | RPD_0134 | RPD_3364 | Beta-lactamase-like. | FAD linked oxidase-like. | 0.904 |
RPD_0134 | gloB | RPD_0134 | RPD_0093 | Beta-lactamase-like. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.913 |
RPD_1207 | gloB | RPD_1207 | RPD_0093 | Glyoxalase/bleomycin resistance protein/dioxygenase. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.499 |
RPD_1406 | RPD_0134 | RPD_1406 | RPD_0134 | Protein of unknown function DUF882. | Beta-lactamase-like. | 0.727 |
RPD_1406 | gloB | RPD_1406 | RPD_0093 | Protein of unknown function DUF882. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.422 |
RPD_1760 | RPD_2034 | RPD_1760 | RPD_2034 | Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily. | Alcohol dehydrogenase, zinc-binding; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | 0.478 |
RPD_1760 | RPD_2528 | RPD_1760 | RPD_2528 | Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily. | Glyoxalase/bleomycin resistance protein/dioxygenase. | 0.432 |
RPD_1760 | gloB | RPD_1760 | RPD_0093 | Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.661 |
RPD_2034 | RPD_1760 | RPD_2034 | RPD_1760 | Alcohol dehydrogenase, zinc-binding; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.478 |
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