Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPD_0124 | RPD_1953 | RPD_0124 | RPD_1953 | Penicillin-binding protein 1A. | Penicillin-binding protein 1A. | 0.912 |
RPD_0124 | RPD_2444 | RPD_0124 | RPD_2444 | Penicillin-binding protein 1A. | Penicillin-binding protein 1A. | 0.946 |
RPD_0124 | RPD_2447 | RPD_0124 | RPD_2447 | Penicillin-binding protein 1A. | Peptidase M23B. | 0.655 |
RPD_0124 | RPD_2647 | RPD_0124 | RPD_2647 | Penicillin-binding protein 1A. | RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.657 |
RPD_0124 | RPD_2714 | RPD_0124 | RPD_2714 | Penicillin-binding protein 1A. | Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family. | 0.912 |
RPD_0124 | RPD_3395 | RPD_0124 | RPD_3395 | Penicillin-binding protein 1A. | Cell cycle protein; Belongs to the SEDS family. | 0.776 |
RPD_0124 | RPD_3400 | RPD_0124 | RPD_3400 | Penicillin-binding protein 1A. | Peptidoglycan glycosyltransferase. | 0.855 |
RPD_0124 | mltG | RPD_0124 | RPD_2976 | Penicillin-binding protein 1A. | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.726 |
RPD_0124 | murC | RPD_0124 | RPD_3393 | Penicillin-binding protein 1A. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.680 |
RPD_0124 | murG | RPD_0124 | RPD_3394 | Penicillin-binding protein 1A. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.715 |
RPD_1953 | RPD_0124 | RPD_1953 | RPD_0124 | Penicillin-binding protein 1A. | Penicillin-binding protein 1A. | 0.912 |
RPD_1953 | RPD_2444 | RPD_1953 | RPD_2444 | Penicillin-binding protein 1A. | Penicillin-binding protein 1A. | 0.948 |
RPD_1953 | RPD_2447 | RPD_1953 | RPD_2447 | Penicillin-binding protein 1A. | Peptidase M23B. | 0.596 |
RPD_1953 | RPD_2647 | RPD_1953 | RPD_2647 | Penicillin-binding protein 1A. | RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.630 |
RPD_1953 | RPD_2714 | RPD_1953 | RPD_2714 | Penicillin-binding protein 1A. | Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family. | 0.912 |
RPD_1953 | RPD_3395 | RPD_1953 | RPD_3395 | Penicillin-binding protein 1A. | Cell cycle protein; Belongs to the SEDS family. | 0.780 |
RPD_1953 | RPD_3400 | RPD_1953 | RPD_3400 | Penicillin-binding protein 1A. | Peptidoglycan glycosyltransferase. | 0.862 |
RPD_1953 | mltG | RPD_1953 | RPD_2976 | Penicillin-binding protein 1A. | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.665 |
RPD_1953 | murC | RPD_1953 | RPD_3393 | Penicillin-binding protein 1A. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.630 |
RPD_1953 | murG | RPD_1953 | RPD_3394 | Penicillin-binding protein 1A. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.733 |
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