Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPD_0128ABC-2. (276 aa)    
Predicted Functional Partners:
RPD_0129
ABC transporter related.
 
  
 0.981
RPD_0130
ATP-binding region, ATPase-like.
       0.626
RPD_0641
cob(II)yrinic acid a,c-diamide reductase.
  
  
 0.549
RPD_3154
Nitroreductase.
  
  
 0.549
RPD_3262
Nitroreductase.
  
  
 0.549
RPD_3603
Nitroreductase.
  
  
 0.549
RPD_2930
Abortive infection protein.
  
  
 0.529
RPD_1793
ABC transporter related.
  
  
 0.454
RPD_3370
ABC transporter related.
  
  
 0.454
RPD_4354
ABC transporter related.
  
  
 0.454
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.