STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_0153Chemotaxis sensory transducer. (602 aa)    
Predicted Functional Partners:
RPD_3678
ATP-binding region, ATPase-like.
 
 
 0.965
RPD_3677
CheW protein.
 
 
 0.899
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.847
RPD_1494
MCP methyltransferase, CheR-type.
 
 
 0.839
RPD_3674
MCP methyltransferase, CheR-type.
 
 
 0.839
RPD_1393
Putative sensor (PAS) domain for methyl-accepting chemotaxis sensory transducer.
 
 0.639
RPD_3676
Response regulator receiver.
 
 
 0.532
RPD_1285
Response regulator receiver.
 
 
 0.528
RPD_0152
DNA repair protein RadC; Belongs to the UPF0758 family.
       0.487
RPD_4123
Conserved hypothetical protein.
 
 
 0.471
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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