Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPD_0286Cobalt chelatase, pCobT subunit. (631 aa)    
Predicted Functional Partners:
RPD_0287
Hydrogenobyrinic acid a,c-diamide cobaltochelatase.
 
 
 0.994
RPD_0636
Hydrogenobyrinic acid a,c-diamide cobaltochelatase.
     
 0.911
cobB
Hydrogenobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
     
 0.903
RPD_0929
ATP:cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
    
  0.902
RPD_0635
cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
     
  0.900
RPD_0285
Conserved hypothetical protein.
       0.857
RPD_0290
Heat shock protein DnaJ-like.
 
     0.789
RPD_0203
DNA helicase/exodeoxyribonuclease V, subunit B.
  
     0.596
RPD_0894
Global cell cycle regulator GcrA.
  
     0.588
RPD_3881
Conserved hypothetical protein.
  
     0.557
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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