Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPD_0356Isovaleryl-CoA dehydrogenase. (392 aa)    
Predicted Functional Partners:
RPD_0807
3-hydroxyacyl-CoA dehydrogenase, NAD-binding; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.980
RPD_0351
Propionyl-CoA carboxylase.
 
 
 0.968
RPD_2534
Propionyl-CoA carboxylase.
 
 
 0.959
RPD_1908
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.941
RPD_0350
3-methylcrotonoyl-CoA carboxylase, alpha subunit.
  
 0.936
RPD_2535
Carbamoyl-phosphate synthase L chain, ATP-binding.
  
 0.917
RPD_3693
isovaleryl-CoA dehydrogenase.
  
  
 
0.901
RPD_0355
Short-chain dehydrogenase/reductase SDR.
  
  0.826
RPD_3553
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.814
RPD_0354
Enoyl-CoA hydratase.
  
 0.807
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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