Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPD_0465Putative AlgJ protein, required for O-acetylation of alginate in Pseudomonas aeruginosa. (392 aa)    
Predicted Functional Partners:
RPD_0466
Membrane bound O-acyl transferase, MBOAT; Belongs to the membrane-bound acyltransferase family.
 
     0.848
RPD_1664
Conserved hypothetical protein.
 
     0.768
RPD_2344
Conserved hypothetical protein.
 
   
 0.766
RPD_2095
Conserved hypothetical protein.
  
     0.745
RPD_2580
Conserved hypothetical protein.
  
     0.743
RPD_0795
Putative outer membrane protein.
  
     0.736
RPD_2345
Conserved hypothetical protein.
  
     0.735
RPD_0459
Histidine kinase, HAMP region.
  
     0.734
RPD_3871
Late embryogenesis abundant protein.
  
     0.734
RPD_2017
Outer membrane autotransporter barrel.
  
   
 0.727
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.