Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPD_0482Cation diffusion facilitator family transporter. (372 aa)    
Predicted Functional Partners:
RPD_0479
Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
    0.514
RPD_0481
Succinate dehydrogenase subunit C.
     
 0.484
RPD_0480
Succinate dehydrogenase subunit D.
       0.482
RPD_2308
Heavy metal translocating P-type ATPase.
  
  
 0.422
RPD_1860
FAD dependent oxidoreductase.
  
    0.411
RPD_3782
Putative monooxygenase.
  
    0.411
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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