STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_0600ATP-binding region, ATPase-like. (449 aa)    
Predicted Functional Partners:
RPD_0601
Response regulator receiver.
 
  
 0.995
RPD_0131
Response regulator receiver.
 
  
 0.969
RPD_0130
ATP-binding region, ATPase-like.
 
 
0.930
RPD_0599
Surfeit locus 1.
 
     0.911
RPD_0598
Cytochrome C oxidase subunit IV.
 
     0.903
RPD_0595
Ubiquinol oxidase, subunit II.
 
   
 0.892
RPD_0597
Cytochrome c oxidase, subunit III.
 
     0.857
RPD_0596
Cytochrome-c oxidase; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.802
RPD_0594
General substrate transporter.
 
     0.782
RPD_0821
Putative surfeit 1.
 
     0.633
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.