Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPD_0621Formate dehydrogenase delta subunit. (71 aa)    
Predicted Functional Partners:
RPD_0623
Formate dehydrogenase, alpha subunit.
 
 0.999
RPD_0625
NADH dehydrogenase (ubiquinone), 24 kDa subunit.
 
 
 0.999
RPD_0624
NADH dehydrogenase (quinone).
 
 
 0.998
fdhD
Formate dehydrogenase family accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
   
 0.977
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
     
 0.903
frc
L-carnitine dehydratase/bile acid-inducible protein F; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate (By similarity); Belongs to the CoA-transferase III family. Frc subfamily.
     
  0.900
RPD_3859
Formamidase.
     
  0.900
RPD_0626
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
   
 0.872
RPD_1329
NADH dehydrogenase (ubiquinone), 24 kDa subunit.
   
 
 0.846
RPD_1330
NADH dehydrogenase (quinone).
   
 
 0.811
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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