Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPD_0630Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (341 aa)    
Predicted Functional Partners:
RPD_0631
ABC transporter related.
 
 
 0.985
RPD_0632
Periplasmic binding protein.
 
 
 0.978
hmuV
ABC transporter related; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.898
RPD_2923
ABC transporter related.
 
 
 0.898
RPD_2350
Periplasmic binding protein.
 
 
 0.887
RPD_2478
ABC transporter related.
 
 
 0.872
RPD_2922
Periplasmic binding protein.
 
 
 0.872
RPD_0629
High-affinity nickel-transporter; Belongs to the NiCoT transporter (TC 2.A.52) family.
     
 0.821
cobD
Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
     
 0.800
RPD_2480
Periplasmic binding protein.
 
 
 0.798
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.