STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_0652Conserved hypothetical protein; Belongs to the UPF0753 family. (808 aa)    
Predicted Functional Partners:
RPD_0653
NADH/Ubiquinone/plastoquinone (complex I).
  
 0.984
RPD_0654
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.886
RPD_0650
Conserved hypothetical protein.
     0.823
RPD_0495
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
    0.642
RPD_0790
Carbonic anhydrase.
  
    0.642
RPD_0651
Phosphoglycerate mutase.
 
     0.566
RPD_2874
Proton-translocating NADH-quinone oxidoreductase, chain L.
 
  
 0.520
RPD_0676
NADH dehydrogenase (quinone).
  
  
 0.504
RPD_1336
Proton-translocating NADH-quinone oxidoreductase, chain L.
 
  
 0.496
RPD_0014
Conserved hypothetical protein.
  
     0.436
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.