Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPD_0673Cation antiporter. (162 aa)    
Predicted Functional Partners:
RPD_0671
Na+/H+ antiporter subunit.
 
 
 0.999
RPD_0672
Multiple resistance and pH regulation protein F.
 
 
 0.999
RPD_0675
NADH-ubiquinone oxidoreductase, chain 4L.
 
 
 0.999
RPD_0676
NADH dehydrogenase (quinone).
 
 
 0.999
RPD_0674
NADH dehydrogenase (quinone).
 
 
 0.998
RPD_3855
NADH dehydrogenase (quinone).
  
 
 0.945
RPD_3852
NADH dehydrogenase (quinone).
  
 
 0.944
nuoC
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
   
 
 0.871
RPD_0653
NADH/Ubiquinone/plastoquinone (complex I).
 
 
 0.864
RPD_2874
Proton-translocating NADH-quinone oxidoreductase, chain L.
  
 
 0.841
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.