STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_0697GCN5-related N-acetyltransferase. (169 aa)    
Predicted Functional Partners:
ppa
Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
       0.667
RPD_0181
Protein of unknown function DUF1150.
  
     0.586
RPD_0698
Amine oxidase.
 
     0.574
RPD_3042
Conserved hypothetical protein.
  
     0.544
RPD_1449
Phasin 2.
 
     0.539
RPD_1013
Outer membrane autotransporter barrel.
  
     0.516
RPD_0695
Peptidase M20.
       0.515
RPD_0792
Conserved hypothetical protein.
  
     0.508
RPD_2786
Allergen V5/Tpx-1 related.
  
     0.484
RPD_1234
Conserved hypothetical protein.
  
     0.477
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.