STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_0728Short-chain dehydrogenase/reductase SDR. (245 aa)    
Predicted Functional Partners:
RPD_0727
DSBA oxidoreductase.
 
     0.819
RPD_0729
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
       0.592
RPD_3782
Putative monooxygenase.
 
  
 0.481
RPD_1858
Putative acetyl-CoA acetyltransferase.
 
     0.476
RPD_1861
Short-chain dehydrogenase/reductase SDR.
 
  
 0.464
RPD_1864
Conserved hypothetical protein.
 
     0.447
RPD_0269
Short-chain dehydrogenase/reductase SDR.
 
  
 0.446
RPD_1834
Fatty acid desaturase.
  
   
 0.437
RPD_3465
Gluconolactonase.
 
     0.431
RPD_3711
Glutathione S-transferase-like.
 
  
 0.419
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.