Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPD_0736Copper-translocating P-type ATPase. (731 aa)    
Predicted Functional Partners:
RPD_0737
Cytochrome oxidase maturation protein, cbb3-type.
 
  
 0.943
RPD_0735
FixH.
 
  
 0.940
RPD_0731
Cytochrome c oxidase, cbb3-type, subunit II.
 
   
 0.913
RPD_0734
4Fe-4S ferredoxin, iron-sulfur binding.
 
  
 0.904
RPD_0733
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
   
 0.869
RPD_0730
Cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.865
RPD_0738
Conserved hypothetical protein.
       0.732
RPD_2308
Heavy metal translocating P-type ATPase.
 
 
0.682
RPD_2309
Heavy metal transport/detoxification protein.
 
 
 0.674
RPD_0732
Cbb3-type cytochrome oxidase component.
     
 0.568
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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