STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPD_0752Methyltransferase type 11. (214 aa)    
Predicted Functional Partners:
RPD_0753
Glycosyl transferase, family 2.
  
  
 0.784
RPD_0750
Polysaccharide biosynthesis protein.
       0.777
RPD_0751
Hypothetical protein.
       0.773
RPD_0755
Glycosyl transferase, group 1.
     
 0.757
RPD_0754
Hypothetical protein.
       0.752
RPD_0749
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.426
RPD_0748
Polysaccharide biosynthesis protein CapD.
     
 0.424
RPD_0745
Sugar transferase.
 
     0.419
RPD_0756
Methyltransferase type 11.
 
 
 
 0.409
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.