STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_0764Diguanylate cyclase/phosphodiesterase. (905 aa)    
Predicted Functional Partners:
RPD_3546
Uncharacterized domain HDIG.
 
  
 0.703
RPD_1287
Diguanylate phosphodiesterase.
 
  
 0.641
RPD_0308
Diguanylate cyclase/phosphodiesterase.
 
 
0.623
RPD_4416
Response regulator receiver modulated metal dependent phosphohydrolase.
 
  
 0.620
RPD_4076
Hpt sensor hybrid histidine kinase.
 
 0.588
RPD_3460
Diguanylate cyclase with PAS/PAC sensor.
 
 
0.540
RPD_0868
Diguanylate cyclase.
 
 
0.495
RPD_2462
Diguanylate cyclase.
 
0.492
RPD_2984
Diguanylate cyclase.
 
 
0.486
RPD_0437
Diguanylate cyclase.
 
 
0.485
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.