STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_0790Carbonic anhydrase. (234 aa)    
Predicted Functional Partners:
RPD_0495
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
  
 
0.923
RPD_0785
Carbonate dehydratase.
     
 0.913
RPD_3284
Transferase hexapeptide repeat.
    
 
 0.779
RPD_1548
Ribulose 1,5-bisphosphate carboxylase small subunit.
    
 
 0.689
RPD_3721
Ribulose 1,5-bisphosphate carboxylase small subunit.
    
 
 0.689
RPD_0652
Conserved hypothetical protein; Belongs to the UPF0753 family.
  
    0.675
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.654
RPD_0791
MATE efflux family protein.
   
   0.537
RPD_0792
Conserved hypothetical protein.
       0.486
RPD_0789
Beta-lactamase-like.
       0.456
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.