node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPD_0002 | RPD_0012 | RPD_0002 | RPD_0012 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Helicase-like protein. | 0.734 |
RPD_0002 | RPD_0793 | RPD_0002 | RPD_0793 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | ATP dependent DNA ligase. | 0.963 |
RPD_0002 | RPD_2650 | RPD_0002 | RPD_2650 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Signal peptidase I. Serine peptidase. MEROPS family S26A; Belongs to the peptidase S26 family. | 0.407 |
RPD_0002 | RPD_3490 | RPD_0002 | RPD_3490 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | ATP dependent DNA ligase. | 0.965 |
RPD_0002 | ligA | RPD_0002 | RPD_3381 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.477 |
RPD_0002 | polA | RPD_0002 | RPD_0956 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.996 |
RPD_0012 | RPD_0002 | RPD_0012 | RPD_0002 | Helicase-like protein. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.734 |
RPD_0012 | RPD_0793 | RPD_0012 | RPD_0793 | Helicase-like protein. | ATP dependent DNA ligase. | 0.664 |
RPD_0012 | RPD_3490 | RPD_0012 | RPD_3490 | Helicase-like protein. | ATP dependent DNA ligase. | 0.664 |
RPD_0012 | polA | RPD_0012 | RPD_0956 | Helicase-like protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.972 |
RPD_0792 | RPD_0793 | RPD_0792 | RPD_0793 | Conserved hypothetical protein. | ATP dependent DNA ligase. | 0.631 |
RPD_0792 | RPD_0794 | RPD_0792 | RPD_0794 | Conserved hypothetical protein. | Putative mRNA 3-end processing factor. | 0.629 |
RPD_0793 | RPD_0002 | RPD_0793 | RPD_0002 | ATP dependent DNA ligase. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.963 |
RPD_0793 | RPD_0012 | RPD_0793 | RPD_0012 | ATP dependent DNA ligase. | Helicase-like protein. | 0.664 |
RPD_0793 | RPD_0792 | RPD_0793 | RPD_0792 | ATP dependent DNA ligase. | Conserved hypothetical protein. | 0.631 |
RPD_0793 | RPD_0794 | RPD_0793 | RPD_0794 | ATP dependent DNA ligase. | Putative mRNA 3-end processing factor. | 0.988 |
RPD_0793 | RPD_0797 | RPD_0793 | RPD_0797 | ATP dependent DNA ligase. | ATP dependent helicase, Lhr family. | 0.835 |
RPD_0793 | RPD_0798 | RPD_0793 | RPD_0798 | ATP dependent DNA ligase. | Metallophosphoesterase. | 0.861 |
RPD_0793 | RPD_2650 | RPD_0793 | RPD_2650 | ATP dependent DNA ligase. | Signal peptidase I. Serine peptidase. MEROPS family S26A; Belongs to the peptidase S26 family. | 0.741 |
RPD_0793 | RPD_3490 | RPD_0793 | RPD_3490 | ATP dependent DNA ligase. | ATP dependent DNA ligase. | 0.599 |