STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_0799Conserved hypothetical protein. (263 aa)    
Predicted Functional Partners:
RPD_0800
Protein of unknown function DUF81.
 
     0.970
RPD_0248
Conserved hypothetical protein.
 
     0.806
RPD_0285
Conserved hypothetical protein.
  
     0.668
RPD_3873
Protein of unknown function DUF526.
  
     0.578
RPD_0801
Sel1.
       0.557
RPD_0369
Hpr(Ser) kinase/phosphatase.
  
     0.554
RPD_0326
Conserved hypothetical protein.
  
     0.522
RPD_3362
Conserved hypothetical protein.
  
     0.515
RPD_1746
Protein of unknown function DUF1476.
  
     0.494
RPD_0735
FixH.
  
     0.474
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.