STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_0809Transcriptional regulator, MarR family. (189 aa)    
Predicted Functional Partners:
RPD_1767
Cupin 2, conserved barrel.
 
  
 0.574
RPD_0808
Glutathione S-transferase-like.
       0.568
RPD_3101
Conserved hypothetical protein.
  
     0.567
RPD_0810
Glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
     
 0.550
RPD_3610
Transcriptional regulator, TetR family.
  
   
 0.543
RPD_3690
Conserved hypothetical protein.
  
     0.541
RPD_2989
Conserved hypothetical protein.
  
   
 0.533
RPD_2104
Substrate-binding region of ABC-type glycine betaine transport system.
  
  
 0.497
RPD_1766
Conserved hypothetical protein.
  
     0.493
RPD_0996
Conserved hypothetical protein.
  
     0.471
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.