Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
RPD_0837ATP-binding region, ATPase-like. (1168 aa)    
Predicted Functional Partners:
RPD_4076
Hpt sensor hybrid histidine kinase.
  
 
 0.973
RPD_1700
Cell cycle control histidine kinase CckA.
  
 
 0.958
RPD_1497
Hpt sensor hybrid histidine kinase.
  
 
 0.952
RPD_3707
L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.946
RPD_3866
Two component transcriptional regulator, LuxR family.
  
 
 0.946
RPD_0119
Sensor histidine kinase with PAS/PAC.
  
 
 0.941
RPD_0284
PAS/PAC sensor hybrid histidine kinase.
  
 
 0.941
RPD_3277
PAS/PAC sensor hybrid histidine kinase.
  
 
 0.941
RPD_1180
PAS/PAC sensor signal transduction histidine kinase.
  
 
 0.921
RPD_1343
PAS/PAC sensor signal transduction histidine kinase.
  
 
 0.921
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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