Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPD_0850 | RPD_0851 | RPD_0850 | RPD_0851 | Homospermidine synthase. | GreA/GreB family elongation factor. | 0.515 |
RPD_0850 | RPD_0852 | RPD_0850 | RPD_0852 | Homospermidine synthase. | Hypothetical protein. | 0.508 |
RPD_0850 | RPD_0853 | RPD_0850 | RPD_0853 | Homospermidine synthase. | Endoribonuclease L-PSP. | 0.404 |
RPD_0851 | RPD_0850 | RPD_0851 | RPD_0850 | GreA/GreB family elongation factor. | Homospermidine synthase. | 0.515 |
RPD_0851 | RPD_0852 | RPD_0851 | RPD_0852 | GreA/GreB family elongation factor. | Hypothetical protein. | 0.790 |
RPD_0851 | RPD_0853 | RPD_0851 | RPD_0853 | GreA/GreB family elongation factor. | Endoribonuclease L-PSP. | 0.411 |
RPD_0852 | RPD_0850 | RPD_0852 | RPD_0850 | Hypothetical protein. | Homospermidine synthase. | 0.508 |
RPD_0852 | RPD_0851 | RPD_0852 | RPD_0851 | Hypothetical protein. | GreA/GreB family elongation factor. | 0.790 |
RPD_0852 | RPD_0853 | RPD_0852 | RPD_0853 | Hypothetical protein. | Endoribonuclease L-PSP. | 0.408 |
RPD_0853 | RPD_0850 | RPD_0853 | RPD_0850 | Endoribonuclease L-PSP. | Homospermidine synthase. | 0.404 |
RPD_0853 | RPD_0851 | RPD_0853 | RPD_0851 | Endoribonuclease L-PSP. | GreA/GreB family elongation factor. | 0.411 |
RPD_0853 | RPD_0852 | RPD_0853 | RPD_0852 | Endoribonuclease L-PSP. | Hypothetical protein. | 0.408 |
RPD_0853 | RPD_0854 | RPD_0853 | RPD_0854 | Endoribonuclease L-PSP. | Conserved hypothetical protein. | 0.526 |
RPD_0853 | RPD_0855 | RPD_0853 | RPD_0855 | Endoribonuclease L-PSP. | GCN5-related N-acetyltransferase. | 0.588 |
RPD_0853 | RPD_2673 | RPD_0853 | RPD_2673 | Endoribonuclease L-PSP. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.473 |
RPD_0853 | RPD_3921 | RPD_0853 | RPD_3921 | Endoribonuclease L-PSP. | Small GTP-binding protein domain. | 0.523 |
RPD_0853 | fusA | RPD_0853 | RPD_3187 | Endoribonuclease L-PSP. | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | 0.523 |
RPD_0853 | nnrD | RPD_0853 | RPD_2899 | Endoribonuclease L-PSP. | Protein of unknown function UPF0031; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the rep [...] | 0.487 |
RPD_0854 | RPD_0853 | RPD_0854 | RPD_0853 | Conserved hypothetical protein. | Endoribonuclease L-PSP. | 0.526 |
RPD_0854 | RPD_0855 | RPD_0854 | RPD_0855 | Conserved hypothetical protein. | GCN5-related N-acetyltransferase. | 0.782 |
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