Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPD_0876Glutamate synthase (NADH) small subunit. (503 aa)    
Predicted Functional Partners:
RPD_0875
Glutamate synthase (NADH) large subunit.
 0.999
RPD_0262
Ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family.
 
 0.993
RPD_0958
Glutamate synthase (NADPH) small chain; Sulfide dehydrogenase (flavoprotein) subunit SudA / sulfide dehydrogenase (flavoprotein) subunit SudB.
 
 
0.981
RPD_2901
L-glutamine synthetase.
  
 
 0.943
RPD_1385
L-glutamine synthetase.
  
 
 0.927
glmS
Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.921
glsA
L-glutaminase; Belongs to the glutaminase family.
     
 0.918
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
  
 
 0.917
RPD_3925
Aminotransferase.
  
 
 0.912
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
 
 0.907
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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