STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_0941Response regulator receiver. (125 aa)    
Predicted Functional Partners:
RPD_3678
ATP-binding region, ATPase-like.
  
 
 0.956
RPD_1686
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
 
 0.934
RPD_3679
Conserved hypothetical protein.
 
  
  0.925
RPD_4356
Response regulator receiver.
 
  
0.921
RPD_4076
Hpt sensor hybrid histidine kinase.
 
 
 
 0.842
RPD_1944
Multi-sensor signal transduction histidine kinase.
 
 
 
 0.783
RPD_1497
Hpt sensor hybrid histidine kinase.
 
 
 
 0.778
RPD_2046
ATP-binding region, ATPase-like.
 
 
 
 0.773
RPD_3676
Response regulator receiver.
 
 
 
 0.762
RPD_3039
Response regulator receiver.
 
 
 
 0.750
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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