Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
RPD_0944Protein of unknown function DUF214. (326 aa)    
Predicted Functional Partners:
ftsE
ABC transporter related; Part of the ABC transporter FtsEX involved in cellular division.
 
 
 0.999
RPD_0567
Peptidase M23B.
 
 
 
 0.934
RPD_1992
Putative phage cell wall peptidase, NlpC/P60.
   
 
 0.769
RPD_3528
NLP/P60.
   
 
 0.769
RPD_0942
Zinc finger/thioredoxin putative.
       0.712
RPD_0945
Protein of unknown function DUF218.
 
     0.702
RPD_3679
Conserved hypothetical protein.
  
     0.644
lptD
Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
  
 0.549
RPD_0946
Phospholipid/glycerol acyltransferase.
       0.548
RPD_1268
Extensin-like.
  
     0.540
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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