Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPD_1205 | RPD_1206 | RPD_1205 | RPD_1206 | Conserved hypothetical protein. | Radical SAM. | 0.591 |
RPD_1205 | RPD_1207 | RPD_1205 | RPD_1207 | Conserved hypothetical protein. | Glyoxalase/bleomycin resistance protein/dioxygenase. | 0.513 |
RPD_1205 | RPD_1209 | RPD_1205 | RPD_1209 | Conserved hypothetical protein. | Hypothetical protein. | 0.586 |
RPD_1205 | rnhB | RPD_1205 | RPD_1208 | Conserved hypothetical protein. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.471 |
RPD_1206 | RPD_1205 | RPD_1206 | RPD_1205 | Radical SAM. | Conserved hypothetical protein. | 0.591 |
RPD_1206 | RPD_1207 | RPD_1206 | RPD_1207 | Radical SAM. | Glyoxalase/bleomycin resistance protein/dioxygenase. | 0.768 |
RPD_1206 | RPD_1209 | RPD_1206 | RPD_1209 | Radical SAM. | Hypothetical protein. | 0.551 |
RPD_1206 | rnhB | RPD_1206 | RPD_1208 | Radical SAM. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.690 |
RPD_1207 | RPD_1205 | RPD_1207 | RPD_1205 | Glyoxalase/bleomycin resistance protein/dioxygenase. | Conserved hypothetical protein. | 0.513 |
RPD_1207 | RPD_1206 | RPD_1207 | RPD_1206 | Glyoxalase/bleomycin resistance protein/dioxygenase. | Radical SAM. | 0.768 |
RPD_1207 | RPD_1209 | RPD_1207 | RPD_1209 | Glyoxalase/bleomycin resistance protein/dioxygenase. | Hypothetical protein. | 0.585 |
RPD_1207 | rnhB | RPD_1207 | RPD_1208 | Glyoxalase/bleomycin resistance protein/dioxygenase. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.616 |
RPD_1209 | RPD_1205 | RPD_1209 | RPD_1205 | Hypothetical protein. | Conserved hypothetical protein. | 0.586 |
RPD_1209 | RPD_1206 | RPD_1209 | RPD_1206 | Hypothetical protein. | Radical SAM. | 0.551 |
RPD_1209 | RPD_1207 | RPD_1209 | RPD_1207 | Hypothetical protein. | Glyoxalase/bleomycin resistance protein/dioxygenase. | 0.585 |
RPD_1209 | rnhB | RPD_1209 | RPD_1208 | Hypothetical protein. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.804 |
rnhB | RPD_1205 | RPD_1208 | RPD_1205 | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | Conserved hypothetical protein. | 0.471 |
rnhB | RPD_1206 | RPD_1208 | RPD_1206 | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | Radical SAM. | 0.690 |
rnhB | RPD_1207 | RPD_1208 | RPD_1207 | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | Glyoxalase/bleomycin resistance protein/dioxygenase. | 0.616 |
rnhB | RPD_1209 | RPD_1208 | RPD_1209 | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | Hypothetical protein. | 0.804 |