Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
RPD_1230Alcohol dehydrogenase, zinc-binding. (328 aa)    
Predicted Functional Partners:
RPD_0807
3-hydroxyacyl-CoA dehydrogenase, NAD-binding; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.919
RPD_1127
Phosphate butyryltransferase.
  
 0.919
RPD_3302
Methylmalonate-semialdehyde dehydrogenase (acylating).
   
 0.915
RPD_3106
acyl-CoA dehydrogenase-like.
  
 0.910
RPD_1908
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.909
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.905
RPD_3103
AMP-dependent synthetase and ligase.
   
 
 0.905
RPD_3298
AMP-dependent synthetase and ligase.
   
 
 0.905
RPD_3984
AMP-dependent synthetase and ligase.
   
 
 0.905
RPD_4221
AMP-dependent synthetase and ligase.
   
 
 0.905
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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