Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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tadAtRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (148 aa)    
Predicted Functional Partners:
hisE
phosphoribosyl-ATP pyrophosphatase.
   
  
 0.782
hisE-2
phosphoribosyl-ATP pyrophosphatase.
   
  
 0.782
tilS
tRNA(Ile)-lysidine synthetase-like; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
  
 0.777
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
 
  
 0.754
RPD_1274
Conserved hypothetical protein 95.
 
     0.695
RPD_4237
HAD-superfamily hydrolase subfamily IA, variant 3.
    
 0.692
RPD_0246
Peptidase M22, glycoprotease.
 
  
 0.661
RPD_2034
Alcohol dehydrogenase, zinc-binding; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
    0.654
RPD_2871
Biotin--acetyl-CoA-carboxylase ligase.
  
    0.653
RPD_1273
Pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family.
     
 0.625
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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