STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_1340Transcriptional regulator, Crp/Fnr family. (229 aa)    
Predicted Functional Partners:
RPD_3266
Cyclic nucleotide-binding.
  
  
 
0.906
RPD_1341
Response regulator receiver.
 
   
 0.763
RPD_1005
Transcriptional regulator, Crp/Fnr family.
  
     0.684
RPD_1723
Transcriptional regulator, Crp/Fnr family.
  
   
 0.666
RPD_1742
Transcriptional regulator, Crp/Fnr family.
  
   
 0.642
RPD_4082
Cyclic nucleotide-binding.
  
   
 0.628
RPD_1343
PAS/PAC sensor signal transduction histidine kinase.
 
 
 
 0.578
RPD_1003
Adenylyl cyclase class-3/4/guanylyl cyclase.
  
 0.472
RPD_1339
O-acetylhomoserine/O-acetylserine sulfhydrylase.
       0.433
aqpZ
MIP family channel proteins; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 0.427
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.