STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_1472Conserved hypothetical protein. (124 aa)    
Predicted Functional Partners:
RPD_3391
Conserved hypothetical protein.
  
     0.663
RPD_4301
Conserved hypothetical protein.
  
     0.601
RPD_3600
Hypothetical protein.
  
     0.566
RPD_1473
Putative urea/short-chain binding protein of ABC transporter.
       0.559
RPD_1981
Conserved hypothetical protein.
  
     0.554
RPD_3255
Conserved hypothetical protein.
  
     0.533
RPD_0919
Conserved hypothetical protein.
  
     0.509
RPD_1985
Conserved hypothetical protein.
  
     0.433
RPD_1474
Hypothetical protein.
       0.413
RPD_1475
Enoyl-CoA hydratase/isomerase.
       0.413
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.