STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_1589ABC transporter related. (250 aa)    
Predicted Functional Partners:
RPD_1587
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.974
RPD_1588
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.974
RPD_1590
ABC transporter related.
 
  
0.902
RPD_1586
Twin-arginine translocation pathway signal.
 
  
 0.893
RPD_1591
Methionine synthase, vitamin-B12 independent.
 
     0.755
RPD_2363
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.740
RPD_0052
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.731
RPD_4369
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.726
RPD_1517
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.716
RPD_0129
ABC transporter related.
    
0.709
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.