Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
RPD_1807Cytochrome P450. (405 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.587
RPD_0969
Cytochrome P450-like.
 
   
 0.564
RPD_3292
Salicylate 1-monooxygenase.
 
 
 0.549
RPD_1828
Phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 0.529
RPD_1643
Ferredoxin.
 
 0.503
RPD_2554
Phosphoesterase, PA-phosphatase related.
  
 0.478
RPD_1015
Monooxygenase, FAD-binding.
 
 
 0.461
RPD_1808
Transcriptional regulator, TetR family.
     
 0.441
RPD_1809
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.438
RPD_3704
Ferredoxin.
  
 0.427
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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