Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPD_1872Sensor histidine kinase. (936 aa)    
Predicted Functional Partners:
RPD_1686
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
  
 0.601
RPD_1873
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
  
 0.600
RPD_1874
Conserved hypothetical protein 698.
       0.581
RPD_4076
Hpt sensor hybrid histidine kinase.
 
 
0.563
RPD_3678
ATP-binding region, ATPase-like.
  
 
 0.549
RPD_1497
Hpt sensor hybrid histidine kinase.
 
 
0.510
RPD_3277
PAS/PAC sensor hybrid histidine kinase.
 
 
0.480
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
  
 0.467
RPD_3087
ATP-binding region, ATPase-like.
 
 
0.451
RPD_1685
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
  
 0.447
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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